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neuroelf_gui [2011/05/08 01:06]
jochen updated stats-loaded image to v0.9c
neuroelf_gui [2011/05/18 15:23] (current)
jochen changing vertical resolution to 204 to include bar
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 ===== GUI layout ===== ===== GUI layout =====
 +{{ youtube>​pMY6fvv-Sj4?​320x204| NeuroElf - basic browsing}}
 The GUI comes in two modes, full and minimized (whereas minimized removes some UI elements from the figure so as to save some space for other windows). The GUI comes in two modes, full and minimized (whereas minimized removes some UI elements from the figure so as to save some space for other windows).
 +\\
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 To bring up the GUI, simply issue the To bring up the GUI, simply issue the
 +\\
  
 <code matlab>% bring up NeuroElf GUI <code matlab>% bring up NeuroElf GUI
 neuroelf_gui</​code>​ neuroelf_gui</​code>​
 +\\
  
-call. It will take a couple of seconds (especially if the xfigure class needs to be run-time compiled by Matlab on its first call), after which the following UI figure will appear:+call. It will take a couple of seconds (especially if the xfigure class needs to be run-time compiled by Matlab on its first call), after which the following UI figure will appear ​(watch the video on the right hand side, also available in [[NeuroElf basic browsing|full resolution]]):
  
-{{:​neuroelf_gui:​main_ui_empty.png?​640|NeuroElf Viewer (full mode, no stats)}}+{{:​neuroelf_gui:​main_ui_empty_v09c_110512.png?​640|NeuroElf Viewer (full mode, no stats)}}
  
-After loading or creating some statistical map (and, in this case, the Colin brain VMR), the display has more buttons un-grayed:+After creating some additional files (see [[neuroelf_makefiles]] for more instructions), ​loading or creating some statistical map (and, in this case, the newly created ​Colin brain VMR) and using the Clustertable functionality, the display has more buttons un-grayed:
  
-{{:​neuroelf_gui:​main_ui_v09c_110507.png?​640|NeuroElf GUI (full mode with stats)}}+{{:​neuroelf_gui:​main_ui_v09c_110512.png?​640|NeuroElf GUI (full mode with stats)}}
  
 Here is a full-resolution version with numbered areas which are explained below: Here is a full-resolution version with numbered areas which are explained below:
  
-{{:​neuroelf_gui:​main_ui_panels_v09c_110507.png|NeuroElf GUI (full mode, panels)}}+{{:​neuroelf_gui:​main_ui_panels_v09c_110512.png|NeuroElf GUI (full mode, panels)}}
  
 The numbered sections in turn mean: The numbered sections in turn mean:
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 The view/page selection buttons, from top to bottom, mean: The view/page selection buttons, from top to bottom, mean:
   * undocking (create a secondary, satellite figure containing the current view, allowing to investigate multiple maps/​datasets,​ potentially at the same coordinate via linked browsing)   * undocking (create a secondary, satellite figure containing the current view, allowing to investigate multiple maps/​datasets,​ potentially at the same coordinate via linked browsing)
 +  * toggle between linked and linked browsing (state obversable)
 +  * minimize/​maximize window
   * switch to three-slice view (page 1, default on startup)   * switch to three-slice view (page 1, default on startup)
   * switch to sagittal-zoomed view (page 2, SAG)   * switch to sagittal-zoomed view (page 2, SAG)
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   * switch to surface rendering view (page 3)   * switch to surface rendering view (page 3)
   * invoke voxel-based rendering dialog   * invoke voxel-based rendering dialog
-  * minimize/​maximize window 
  
 ==== Minimized mode ==== ==== Minimized mode ====
-Upon clicking ​this last, bottom-most ​button, the window will convert to minimized view (if it is in full mode, that is):+Upon clicking ​the third button ​(which will be replaced with a different version), the window will convert to minimized view (if it is in full mode, that is):
  
-{{:​neuroelf_gui:​neuroelf_gui_minimized_v09c.png|NeuroElf GUI (minimized)}}+{{:​neuroelf_gui:​neuroelf_gui_minimized_v09c_110512.png|NeuroElf GUI (minimized)}}
  
 The elements on the left side of the figure (file/map selector, cluster and table output) will be hidden from view to free up some space for other windows. The following sections remain: The elements on the left side of the figure (file/map selector, cluster and table output) will be hidden from view to free up some space for other windows. The following sections remain:
neuroelf_gui.1304809561.txt.gz ยท Last modified: 2011/05/08 01:06 by jochen