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fmriquality [2010/06/17 14:32] – added note about required cell array of first arg jochenfmriquality [2010/06/17 15:15] – added final comment about thresholds being fixed for now jochen
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 <code matlab fmriquality_example4.m>% using a single NII file <code matlab fmriquality_example4.m>% using a single NII file
 qas = fmriquality({'vols.nii'});</code> qas = fmriquality({'vols.nii'});</code>
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 +Also, please note that motion parameter estimation requires between one and several minutes (depending of the length of the run and whether or not robust motion estimation is employed). The **runtime also easily increases tenfold when robust temporal filtering is used**. In other words, these options are more useful and meant for situations where the fmriquality function is part of a larger script that automatically checks the quality of all incoming data instead of being used from the command line in a more interactive way!
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 +Finally, at the moment, the "problem detection" thresholds (to mark a volume as outliers) are fixed, but are likely to change in a future version.
fmriquality.txt · Last modified: 2010/11/26 18:50 by jochen