This shows you the differences between two versions of the page.
Both sides previous revision Previous revision Next revision | Previous revision | ||
neuroelf_gui [2011/05/12 07:33] jochen updated panels screenshot (v0.9c, 110512) |
neuroelf_gui [2011/05/18 15:23] jochen changing vertical resolution to 204 to include bar |
||
---|---|---|---|
Line 7: | Line 7: | ||
===== GUI layout ===== | ===== GUI layout ===== | ||
+ | {{ youtube>pMY6fvv-Sj4?320x204| NeuroElf - basic browsing}} | ||
The GUI comes in two modes, full and minimized (whereas minimized removes some UI elements from the figure so as to save some space for other windows). | The GUI comes in two modes, full and minimized (whereas minimized removes some UI elements from the figure so as to save some space for other windows). | ||
+ | \\ | ||
+ | \\ | ||
+ | \\ | ||
+ | \\ | ||
+ | \\ | ||
To bring up the GUI, simply issue the | To bring up the GUI, simply issue the | ||
+ | \\ | ||
<code matlab>% bring up NeuroElf GUI | <code matlab>% bring up NeuroElf GUI | ||
neuroelf_gui</code> | neuroelf_gui</code> | ||
+ | \\ | ||
- | call. It will take a couple of seconds (especially if the xfigure class needs to be run-time compiled by Matlab on its first call), after which the following UI figure will appear: | + | call. It will take a couple of seconds (especially if the xfigure class needs to be run-time compiled by Matlab on its first call), after which the following UI figure will appear (watch the video on the right hand side, also available in [[NeuroElf basic browsing|full resolution]]): |
- | {{:neuroelf_gui:main_ui_empty.png?640|NeuroElf Viewer (full mode, no stats)}} | + | {{:neuroelf_gui:main_ui_empty_v09c_110512.png?640|NeuroElf Viewer (full mode, no stats)}} |
- | After loading or creating some statistical map (and, in this case, the Colin brain VMR), the display has more buttons un-grayed: | + | After creating some additional files (see [[neuroelf_makefiles]] for more instructions), loading or creating some statistical map (and, in this case, the newly created Colin brain VMR) and using the Clustertable functionality, the display has more buttons un-grayed: |
- | {{:neuroelf_gui:main_ui_v09c_110507.png?640|NeuroElf GUI (full mode with stats)}} | + | {{:neuroelf_gui:main_ui_v09c_110512.png?640|NeuroElf GUI (full mode with stats)}} |
Here is a full-resolution version with numbered areas which are explained below: | Here is a full-resolution version with numbered areas which are explained below: | ||
Line 116: | Line 124: | ||
The view/page selection buttons, from top to bottom, mean: | The view/page selection buttons, from top to bottom, mean: | ||
* undocking (create a secondary, satellite figure containing the current view, allowing to investigate multiple maps/datasets, potentially at the same coordinate via linked browsing) | * undocking (create a secondary, satellite figure containing the current view, allowing to investigate multiple maps/datasets, potentially at the same coordinate via linked browsing) | ||
+ | * toggle between linked and linked browsing (state obversable) | ||
+ | * minimize/maximize window | ||
* switch to three-slice view (page 1, default on startup) | * switch to three-slice view (page 1, default on startup) | ||
* switch to sagittal-zoomed view (page 2, SAG) | * switch to sagittal-zoomed view (page 2, SAG) | ||
Line 123: | Line 133: | ||
* switch to surface rendering view (page 3) | * switch to surface rendering view (page 3) | ||
* invoke voxel-based rendering dialog | * invoke voxel-based rendering dialog | ||
- | * minimize/maximize window | ||
==== Minimized mode ==== | ==== Minimized mode ==== | ||
- | Upon clicking this last, bottom-most button, the window will convert to minimized view (if it is in full mode, that is): | + | Upon clicking the third button (which will be replaced with a different version), the window will convert to minimized view (if it is in full mode, that is): |
- | {{:neuroelf_gui:neuroelf_gui_minimized_v09c.png|NeuroElf GUI (minimized)}} | + | {{:neuroelf_gui:neuroelf_gui_minimized_v09c_110512.png|NeuroElf GUI (minimized)}} |
The elements on the left side of the figure (file/map selector, cluster and table output) will be hidden from view to free up some space for other windows. The following sections remain: | The elements on the left side of the figure (file/map selector, cluster and table output) will be hidden from view to free up some space for other windows. The following sections remain: |